Center Publications
Below are the Center publications. Use the options to the left to select the year and limit the type of publication you would like to view.
Peer Reviewed Journal Publications
- Bae, E., Aroonnual, A., Bhunia, A. K., Robinson, J. P., Hirleman, E.D. System automation for a bacterial colony detection and identification instrument via forward scattering. Measurement Science and Technology. 2009. v. 20. p. 015082.
- Banada, P. P., Huff, K., Bae, E., Rajwa, B., Bayraktar, B., Aroonnual, A., Adil, A., Robinson, J. P., Hirleman, E. D., Bhunia, A. K. Label-free detection of multiple bacterial pathogens using light scattering sensor. Biosensors and Bioelectronics. 2009. v. 24. p. 1685-1692.
- Banerjee, P., Bhunia. A. K. Mammalian cell-based biosensors for pathogens and toxins. Trends in Biotechnology. 2009. v. 27. p. 179-188.
- Banerjee, P., Merkel, G. J., Bhunia, A. K. Lactobacillus delbrueckii ssp. bulgaricus B-30892 can inhibit cytotoxic effects and adhesion of pathogenic Clostridium difficile to Caco-2 cells. Gut Pathogens. 2009. v. 1. p. 8.
- Bhattacharya, S., Chanda, N., Liu, Y., Gangopadhyay, K., Bashir, R., Sharp, P. R., Gangopadhyay, S. Enhanced DNA separation rates in nano-platinum doped Agarose. Journal of Bionanosciences. 2008. v. 2. p. 1-8.
- Bhattacharya, S., Gangopadhyay, D., Chanda, N., Grant, S. A., Liu, Y., Sharp, P. R., Bashir, R., Gangopadhyay, K., Gangopadhyay, S. Low voltage capillary electrophoresis using high conductivity agarose nano-platinum composites. Sensor Letters. 2008. v. 6. p. 1-6.
- Bhattacharya, S., Salamat, S., Morisette, D., Banada, P., Akin, D., Liu, Y. S., Bhunia, A. K., Ladisch, M., Bashir, R. PCR-based detection in a micro-fabricated platform. Lab on a Chip. 2008. v. 8. p. 1130-1136.
- Burgula, Y., Reuhs, B. L., Mauer, L. J. Rapid FT-IR methods for detection of Escherichia coli O157:H7 in fruit juices. World of Food Science. 2009. v. 3.
- Burkholder, K. M., Bhunia, A. K. Salmonella enterica serovar Typhimurium adhesion and cytotoxicity during epithelial cell stress is reduced by Lactobacillus rhamnosus GG. Gut Pathogens. 2009. v. 1. p. 14.
- Burkholder, K. M., Kim, K-P., Mishra, K., Medina, S., Hahm, B-K., Kim, H., Bhunia, A. K. Expression of LAP, an SecA2-dependent secretory protein, is induced under anaerobic environment. Microbes and Infection. 2009. v. 11. p. 859-867.
- Geng, T., Bao, N., Gall, O.Z., Lu, C. Modulating DNA adsorption on silica beads using an electrical switch. Chemical Communications. 2009. p. 800-802.
- Kim, G., Moon, J. H., Hahm, B. K., Morgan, M., Bhunia, A., Om, A. S. Rapid detection of Salmonella Enteritidis in pork samples with impedimetric biosensor: Effect of electrode spacing on sensitivity. Food Science and Biotechnology. 2009. v. 18. p. 89-94.
- Koo, O. K., Salamat, S., Liu, Y., Ladisch, M. R., Bashir, R., Bhunia, A. K. Targeted capture of pathogenic bacteria using mammalian cell receptor on microfluidic chip. Analytical Chemistry. 2009. v. 81. p. 3094-3101.
- Krishnamurthy, K., Tewari, J., Irudayaraj, J., Demirci, A. Microscopic and spectroscopic analysis of inactivation of Staphylococcus aureus by pulsed UV-light and infrared heating. Food and Bioprocess Engineering: An International Journal. 2008.
- Lee, K., Irudayaraj, J. Periodic and dynamic 3-D gold nanoparticle-DNA network structures for surface-enhanced raman spectroscopy-based quantification. Journal of Physical Chemistry. 2009. v. 113. p. 5980-5983.
- Liu, Y. S., Bashir. R. Electrical detection of DNA molecules. BMES Bulletin. 2008. v. 32. No. 3. p. 14-15.
- Ravindranath, S., Mauer, L., Chitrita, D., Irudayaraj, J. Biofunctionalized magnetic nanoparticle integrated mid-infrared pathogen sensors for food matrices. Analytical Chemistry. 2009. v. 81. p. 2840-2846.
- Stanciu, L., Won, Y. H., Ganesana, M., Andreescu, S. Magnetic particle-based hybrid platforms for bioanalytical sensors. Sensors. 2009. v. 9. p. 2976-2999.
- Sun, L., Irudayaraj, J. Quantitative surface-enhanced raman for gene expression estimation. Biophysical Journal. 2009. v. 96. p. 4709-4716.
- Valadez, A. M., Lana, C. A., S. I., Morgan, M. T., Bhunia, A. K. Evanescent wave fiber-optic biosensor for detection of Salmonella from food. Sensors. 2009. v. 9.
- Wang, C., Irudayaraj, J. Gold nanorod probes detect multiple pathogens. Small. 2008. v. 4. p. 2204-2208.
- Yang, L., Banada, P., Bhunia, A., Bashir, R. Effects of dielectrophoresis on the immuno-reactivity, the growth profile, and the viability of Listeria monocytogenes. Journal of Biological Engineering. 2008. v. 2:6.
- Yang, L., Bashir, R. Electrical/electrochemical impedance for rapid detection of foodborne pathogenic bacteria. Review Article. Biotechnology Progress. Biotechnology Advances. 2008. v. 26. p. 135-150.
- Zordan, M. D., Grafton, M. M. G., Acharya, G., Reece, L. M., Cooper, C. L., Aronson, A. I., Park, K., Leary, J. F. Detection of pathogenic E. coli O157:H7 by a hybrid microfluidic SPR and molecular imaging cytometry device. Cytometry Part A. 2009. v. 75A. p. 155-162.
- Bae, E., Banada, P.P., Huff, K., Bhunia, A.K., Robinson, J.P., Hirleman, E.D., Analysis of time-resolved scattering from macroscale bacterial colonies. Journal of Biomedical Optics. 2008. v. 13 (1). p. 014010.
- Bae, E., Banada, P.P., Huff, K., Bhunia, A.K., Robinson, J.P., Hirleman, E.D., Bio-physical modeling of forward scattering from bacterial colonies using scalar diffraction theory. Applied Optics. v. 46 (17) p. 3639-3648 (2007).
- Banada, P.P., Guo, S., Bayraktar, B., Bae, E., Rajwa, B., Robinson, J.P., Hirleman, E.D., Bhunia, A.K., Optical forward scattering for colony identification and differentiation of Listeria species. Biosensors and Bioelectronics. v. 22 (8). p.1664-1671 (2007).
- Banerjee, P., Lenz, D., Robinson, J.P., Rickus, J.L., Bhunia, A.K., A novel and simple cell-based detection system with collagen-encapsulated B-lymphocyte cell line as a biosensor for rapid detection of pathogens and toxins. Laboratory Investigation. 2008. v. 88. p. 196-206.
- Banerjee, P., Morgan, M.T., Rickus, J.L., Ragheb, K., Corvalan, C., Robinson, J.P., Bhunia, A.K., Hybridoma Ped-2E9 cells cultured under modified conditions can sensitively detect Listeria monocytogenes and Bacillus cereus. Applied Microbiology and Biotechnology. v. 73. p. 1423-1434 (2007).
- Bao, N., Jagadeesan, B., Bhunia, A.K., Yao, Y., Lu, C., Quantification of bacterial cells based on autofluorescence on a microfluidic platform. Journal of Chromatography. 2008. v. 1181. p. 153-158.
- Bao, N., Lu, C., A microfluidic device for physical trapping and electrical lysis of bacterial cells. Applied Physics Letters. 2008. v. 92. p. 214103.
- Bao, N., Wang, J., Lu, C., Recent advances in electric analysis of cells in microfluidic systems. Analytical and Bioanalytical Chemistry. 2008. v. 391. p. 933-942.
- Bashir, R., BioMEMS: State of the Art in Detection and Future Prospects, Invited Paper in Advanced Drug Delivery Review, Special issue: Intelligent Therapeutics: Biomimetic Systems and Nanotechnology in Drug Delivery, Edited by N.A. Peppas, 56(11), 1565-1586 (2004).
- Bayraktar, B., Banada, P.P., Hirleman, E.D., Bhunia, A.K., Robinson, J.P., Rajwa. B., Bacterial phenotype identification using Zernike moment invariants. Proceedings of the Society for PhotoOptical Instrumentation Engineers. 2006. v. 6080. p. 155-162
- Bayraktar, B., Banada, P.P., Hirleman, E.D., Bhunia, A.K., Robinson, J.P., Rajwa, B., Feature extraction from light-scatter patterns of Listeria colonies for identification and classification. Journal of Biomedical Optics. v. 11 (3) p. 034006 (2006).
- Bhattacharya, S., Jang, J., Yang, L., Akin, D., Bashir, R., BioMEMS and nanotechnology based approaches for rapid detection of biological entities. Journal of Rapid Methods and Automation in Microbiology. 2007. v. 15. p. 1-32.
- Bhattacharya, S., Salamat, S., Morisette, D., Banada, P., Akin, D., Liu, Y-S., Bhunia, A. K., Ladisch, M., Bashir, R., PCR based-detection in a micro-fabricated platform. Lab on a Chip. 2008. v. 8. p. 1130-1136.
- Bhunia, A.K., Biosensors and bio-based methods for the separation and detection of foodborne pathogens. Advances in Food and Nutrition Research. 2008. v. 54. p. 1-44.
- Bhunia, A.K., Banada, P.P., Banerjee, P., Valadez, A., Hirleman, E.D., Light scattering, fiber optic and cell-based sensors for sensitive detection of foodborne pathogens. Journal of Rapid Methods and Automation in Microbiology. v. 15 (2) p.121-145 (2007).
- Bhunia, A.K., Geng, T., Lathrop, A., Valadez, A., Morgan, M.T., Optical Immunosensors for Detection of Listeria monocytogenes and Salmonella Enteritidis from Food. Proc. of SPIE. 2004 v. 5271, p. 1-6.
- Bhunia, A.K., Robinson, J.P., Ladisch, M.R., Composite Surface for Blocking Bacterial Adsorption on Protein Biochips. Biotechnology and Bioengineering. 2003. v. 81(5), p. 618-624.
- Bright, N.G., Carroll, R.J., Applegate, B.M., A Model System for Pathogen Detection Using a Two-Component Bacteriophage/Bioluminescent Signal Amplification Assay. In Monitoring Food Safety, Agriculture, and Plant Health. Proceedings of SPIE. 2004. v. 5271, p. 13-19.
- Burgula, Y., Khali, D., Kim, S., Cousin, M.A., Gore, J. P., Reuhs, B.L., Mauer, L.J., Review of mid-IR Fourier-transform infrared (FT-IR) spectroscopy applications for bacterial detection. Journal of Rapid Methods and Automation in Microbiology. 2007. v. 15. p. 146-175.
- Burgula, Y., Khali, D., Krishnan, S.S., Cousin, M.A., Gore, J.P., Reuhs, B. L., Mauer, L. J., Detection of E. coli O157:H7 and Salmonella Typhimurium Using Filtration followed by FT-IR Spectroscopy. Journal of Food Protection. (In press).
- Chang, W.J., Akin, D., Sedlak, M., Ladisch, M.R., Bashir, R., Poly(dimethylsiloxane) (PDMS) and Silicon Hybrid Biochip for Bacterial Culture. Biomedical Microdevices. 2003. v. 5(4), p. 281-290.
- Chang, W-J., Ro, K.W., Huang, T.T., Koo, Y-M., Hahn, J. H., Ladisch, M.R., Akin, D., Bashir, R., Bioseparation Techniques in Microfluidic Devices Using Micro-Bead, Theories and Applications of Chem. Eng., 10 (1), 203-206 (2004).
- Chapple, C., Ladisch, M., Meilan, R., Loosening Lignin's grip on biofuel production. Nature Biotechnology. 2007. v. 25 (7). p. 746-748.
- Chen, W-T., Geng, T., Bhunia, A. K., Ladisch, M. R., "Membrane for Selective Capture of the Microbial Pathogen Listeria monocytogenes," AIChE J., 51(12), 3305-3308 (2005).
- Chen, W-T., Geng, T., Bhunia, A.K., Ladisch, M.R., Membrane for Selective Capture of the Microbial Pathogen Listeria monocytogenes, AIChE J. In press. (2005).
- Chen, W-T., Hendrickson, R. L., Huang, C-P., Sherman, D., Geng, T., Bhunia, A. K., Ladisch, M. R., "Mechanistic Study of Membrane Concentration and Recovery of Listeria monocytogenes," Biotechnol. Bioeng., 89, 263-273 (2005).
- Chen, W-T., Hendrickson, R.L., Huang, C-P., Sherman, D., Geng, T., Bhunia, A.K., Ladisch, M.R., Mechanistic Study of Membrane Concentration and Recovery of Listeria monocytogenes, Biotechnol. Bioeng., 89, 263-273 (2005).
- Gaba, A., Li, H., Gomez, R. Bashir, R., Geng, T., Bhunia, A., Sturgis, J., Robinson, J.P., Mosier, N.S., Ladisch, M.R., Covalent Immobilization of anti-Listeria monocytogenes Antibody On A Silica Surface For An Impedance Biosensor Using Silane And Heterobifunctional Crosslinkers, Biomed. Microdevices. In press. (2005).
- Geng, T., Hahm, B.K., Bhunia, A.K., Selective enrichment media affect the antibody-based detection of stress-exposed Listeria monocytogenes due to differential expression of antibody-reactive antigens identified by protein sequencing. Journal of Food Protection. v. 69. p. 1879-1886 (2006).
- Geng, T., Kim, K.P., Sherman, D., Gomez, R., Bashir, R., Ladisch, M., Bhunia, A.K., Expression of cellular antigens of Listeria monocytogenes that react with monoclonal antibodies C11E9 and EM-7G1 under acid-, salt- or temperature-induced stress environments. Journal of Applied Microbiology. 2003. v. 95. p. 762-772.
- Geng, T., Morgan, M.T., Bhunia, A.K., Detection of low levels of Listeria monocytogenes cells using a fiber-optic immunosensor, Applied and Environmental Microbiology, 70, 6138-6146 (2004).
- Geng, T., Uknalis, J., Tu, S.-I., Bhunia, A.K., Fiber optic biosensor employing Alexa-Fluor conjugated antibody for detection of Escherichia coli O157:H7 from ground beef in four hours. Sensors. v. 6. p. 796-807 (2006)
- Gomez, R., Morrisette, D., Bashir, R., Microfluidic BioElectronic Processors for Rapid Detection of Live Bacterial Cells, Accepted in IEEE/ASME Journal of Microelectromechanical Systems. In press. (2005).
- Gray, K.M., Bhunia, A.K., Specific detection of cytopathogenic Listeria monocytogenes using a two-step method of immunoseparation and cytotoxicity analysis. Journal of Microbiological Methods. v. 60. p. 259-269 (2005).
- Hahm, B. K., Bhunia, A. K., Effect of environmental stresses on antibody-based detection of Escherichia coli O157:H7, Salmonella enterica subsp. Enteritidis and Listeria monocytogenes. Journal of Applied Microbiology. 2006. v. 100. p. 1017-1027.
- Hahm, B.K., Maldonado, Y., Schreiber, E., Bhunia, A.K. Nakatsu, C.H., Subtyping of Foodborne and Environmental Isolates of Escherichia coli by Multiplex-PCR, rep-PCR, PFGE, Ribotyping and AFLP. Journal of Microbiological Methods. 2003. v. 53, p.387-399.
- Han, Y., R. H. Linton, and P. E. Nelson, (2004) Effects of recovery, plating, and inoculation methods on quantification of Escherichia coli O157:H7 and Listeria monocytogenes from strawberries. J. Food Protection. (In Press)
- Han, Y., T. L. Selby, K. K. Schneider, R. H. Linton, and P. E. Nelson., (2004) Decontamination of strawberries using batch and continuous chlorine dioxide gas treatments. J. Food Protection. (In press)
- Huang, T., Chang, W.J., Akin, D., Gomez, R., Bashir, R., Mosier, N., Ladisch, M.R., Microfiber Assisted Fabrication of Microfluidic Channels Using Poly(dimethylsiloxane). American Institute of Chemical Engineers (AIChE) Journal. 2003. v. 49(11), p. 2984-2987.
- Huang, T., Geng, T., Sturgis, J., Li, H., Gomez, R., Bashir, R., Bhunia, A.K., Robinson, J.P., Ladisch, M.R., Lysozyme for Capture of Microorganisms on Protein Biochips. Enzyme and Microbial Technology. 2003. v.33, p. 958-966.
- Huang, T., Sturgis, J., Gomez, R., Geng, T., Bashir, R., Bhunia, A.K. Robinson, J.P., Ladisch, M.R., Composite Surface For Blocking Bacterial Adsorption on Protein Biochips. Biotechnol. Bioeng. 2003. v.81(5), p. 618-624.
- Huang, T. T., Taylor, D. G., Sedlak, M., Mosier, N. S., Ladisch, M. R., "Microfiber-directed Boundary Flow in Press-fit Microdevices Fabricated from Self-adhesive Hydrophobic Surfaces," Analytical Chemistry, 77, 3671-3675 (2005).
- Huang, T.T., Taylor, D.G., Sedlak, M., Mosier, N.S., Ladisch, M.R. Microfiber-directed Boundary Flow in Press-fit Microdevices Fabricated from Self-adhesive Hydrophobic Surfaces, Analytical Chemistry, 77, 3671-3675 (2005).
- Iyer, M.S., Cousin, M.A., Immunological detection of Fusarium species in cornmeal. Journal of Food Protection. 2003. v. 65. p. 451-456.
- Jaradat, J.W., Bhunia, A.K., Adhesion, Invasion, and translocation characteristics of Listeria monocytogenes serotypes in a Caco-2 cell and mouse model. Applied and Environmental Microbiology. 2003. v. 69(6). p. 3640-3645.
- Jaradat, Z.W., Bzikot, J.H., Zawistowski, J., Bhunia, A.K., Optimization of a rapid dot-blot immunoassay for detection of Salmonella enterica serovar Enteritidis in poultry products. Food Microbiology. v. 21. p. 761-769 (2004).
- Jaradat, Z.W., Wampler, J.L., Bhunia, A.K., A Listeria adhesion protein-deficient Listeria monocytogenes strain shows reduced adhesion primarily to intestinal cell lines. Medical Microbiology and Immunology. 2003. v. 192. p. 85-91.
- Jedlica, S.S., Little, K.M., Nivens, D.E., Zemlyanov, D., Rickus, J.L., Peptide ormosils as cellular substrates. Journal of Materials Chemistry. 2007. v. 17. p. 5058-5067.
- Jedlica, S.S., McKenzie, J.L., Leavesley, S.J., Little, K.M., Webster, T.J., Robinson, J.P., Nivens, D.E., Rickus, J.L., Surface features of sol-gel derived silica influence protein conformation and neuronal differentiation. Journal of Materials Chemistry. 2006.(in press).
- Kim, G., Morgan, M.T., Ess, D.R., Hahm, B.K., Kothapalli, A., Bhunia, A.K., An automated fiber-optic biosensor based binding inhibition assay for the detection of Listeria monocytogenes. Food Science and Biotechnology. 2007. v. 16(3). p. 337-342.
- Kim, G., Morgan, M.T., Ess, D.R., Hahm, B.K., Kothapalli,A., Valadez, A., Bhunia, A.K., Detection of Listeria monocytogenes using an automated fiber-optic biosensor: Raptor. Key Engineering Materials. v. 321-323. p. 1168-1171 (2006).
- Kim, H., Bhunia, A.K., SEL, a selective enrichment broth for simultaneous growth of Salmonella enterica, Escherichia coli O157:H7, and Listeria monocytogenes. Applied and Environmental Microbiology. 2008. v. 74 (15). p. 4853-4866.
- Kim, H., Kane, M. , Kim, S., Dominguez, W., Applegate, B. Savikhin, S., A molecular beacon DNA microarray system for rapid detection of Escherichia coli O157:H7 that eliminates the risk of a false negative signal. Biosensors and Bioelectronics. 2006. In press.
- Kim, K.P., Hahm, B.K., Bhunia, A.K., The 2-cys peroxiredoxin deficient Listeria monocytogenes displays impaired growth and survival in the presence of hydrogen peroxide in vitro but not in mouse organs. Current Microbiology. v. 54. p. 382-387 (2007).
- Kim, K.-P., Jagadeesan, B., Burkholder, K., Jaradat, Z.W., Wampler, J.L., Lathrop, A.A., Morgan, M.T., Bhunia, A.K., Adhesion characteristics of Listeria adhesion protein (LAP) - expressing Escherichia coli to Caco-2 cells and of recombinant LAP to eukaryotic receptor Hsp60 as examined in a surface plasmon resonance sensor. FEMS Microbiology Letters. 2006. v. 256. p. 324-332.
- Kim, S., Burgula, Y., Ojanen-Reuhs, T., Cousin, M.A., Reuhs, B.L., Mauer, L.J., Differentiation of crude lipopolysaccharides from Escherichia coli strains using Fourier transform infrared spectroscopy and chemometrics. Journal of Food Science. 2006. v. 71. p. 57-61.
- Kim, S., Kim, H., Reuhs, B.L., Mauer, L.J., Differentiation of outer membrane proteins from Salmonella enterica serotypes using Fourier transform infrared spectroscopy and chemometrics. Leters in Applied Microbiology. 2006. v. 42. p. 229-234.
- Kim, S., Reuhs, B.L., Mauer, L.J.., Differentiation and classification of crude lipopolysaccharides from Salmonella strains using Fourier transform infrared spectroscopy and chemometrics. Journal of Applied Microbiology. 99:411-417 (2005).
- Kim, S. S., Huang, T. T., Fisher, T. S., Ladisch, M. R., "Effects of Carbon Nanotube Structure on Protein Adsorption," IMECE 2005-2008 1395, Proceedings of IMECE 2005, 2005 ASME International Mechanical Engineering Congress and Exposition, Orlando, FL, November 5-100 (2005).
- Kim, Y., Hendrickson, R., Mosier, N. S., Ladisch, M. R., Bals, B., Balan, V., Dale, B.E., Enzyme hydrolysis and ethanol fermentation of liquid hot water and afex pretreated distillers' grains at high-solids loadings. Bioresource Technology. 2008. v. 99(12). p. 5206-5215.
- Kim, Y., Mosier, N., Ladisch, M. R., Process simulation of modified dry grind ethanol plant with recycle of pretreated and enzymatically hydrolyzed distillers' grains. Bioresource Technology. 2008. v. 99(12). p. 5177-5192.
- Kim, Y., Mosier, N. S., Hendrickson, R., Ezeji, T., Blaschek, H., Dien, B., Cotta, M., Dale, B., Ladisch M. R., Composition of corn dry-grind ethanol by-products: DDGS, 3 wet cake, and thin stillage. Bioresource Technology. 2008. v. 99(12). p. 5165-5176.
- Ladisch, M., Dale, B., Tyner, W., Mosier, N.S., Kim, Y., Cotta, M., Dien, B.S., Blaschek, H., Laurenas, E., Shanks, B., Verkade, J., Schell, C., Petersen, G., Cellulose conversion in dry grind ethanol plants. Bioresource Technology. 2008. v. 99(12). p. 5157-5159.
- Ladisch, M. R., Dale, D., Distillers grains: On the pathway to cellulose conversion. Bioresource Technology. 2008. v. 99(12) p. 5155-5156.
- Lasrado, J.A., Santerre, C.R., Stahl, J.R., Noltemeyer, T. Deardorff, D.C., Measurement of polychlorinated biphenyls in fish tissue by gas chromatography with electron capture detection and enzyme-linked immunosorbent assay. Journal of Food Protection. 2004. v. 67(6) p. 1209-1213.
- Lasrado, J.A., Santerre, C.R., Zajicek, J.L., Stahl, J.R., Tillitt, D.E., Deardorff, D.C., Determination of PCBs in fish tissue using enzyme-linked immunosorbent assay (ELISA). Journal of Food Science. 2003. v. 68(1) p. 133-136.
- Lathrop. A., Huff, K., Bhunia, A.K., Prevalence of antibodies reactive to pathogenic and nonpathogenic bacteria in preimmune serum of New Zealand white rabbits. Journal of Immunoassay and Immunochemistry. v. 27. p. 351-361 (2006).
- Lathrop, A., Jaradat, Z.W., Haley, T., Bhunia, A.K., Characterization and Application of a Listeria monocytogenes Reactive Monoclonal Antibody C11E9 in a Resonant Mirror Biosensor. Journal of Immunological Methods. 2003. v. 281, p. 119-128.
- Lathrop, A.L., Banada, P.P., Bhunia, A.K., Differential expression of InlB and ActA in Listeria monocytogenes in selective and nonselective enrichment broths. Journal of Applied Microbiology. 2008. v. 104. p. 627-639.
- Lathrop, A.L., Jaradat, Z.W., Haley, T., Bhunia, A.K., Characterization and application of a Listeria monocytogenes reactive monoclonal antibody C11E9 in a resonant mirror biosensor. Journal of Immunological Methods. 2003. v. 281. p.119-128.
- Leake, L.L., Advancing rapid microbial testing. Food Technology. v.60. p. 68-72 (2006)
- Li, H., Bashir, R., On the Design and Optimization of Micro-Fluidic Dielectrophoretic Devices: A Dynamic Simulation Study, Biomedical Microdevices, 6(4), 289–295 (2004).
- Li, H., Yang, L., Akin, D., Bhunia, A., Huang, T.T., Ladisch, M., Bashir, R., Dielectrophoresis and Antibody Mediated Selective Capture of Microorganisms in Microfluidic Biochips, Transducers: Digest of Technical Papers, 2, 1700-1703 (2005).
- Li, H., Zheng, Y., Akin, D., Bashir, R., Characterization and Modeling of a Micro-Fluidic Dielectrophoresis Filter for Biological Species, IEEE/ASME Journal of Microelectromechanical Systems, 14(1), 105-111 (2005).
- Lim, K. S., Chang, W.J., Koo, Y.M., Bashir, R., "Reliable Fabrication Method of Transferable Micron Scale Metal Pattern for Poly(dimethylsiloxane) Metallization", Lab. Chip. 2006. v. 1. 578 - 580.
- Liu, Y-S., Banada, P.P., Bhattacharya, S., Bhunia, A.K., Bashir, R., Electrical characterization of DNA molecules in solution using impedance measurements. Applied Physics Letters. 2008. v. 92. p. 143902.
- Liu, Y-S., Walter, T. M., Chang, W-J., Lim, K-S., Yang, L., Lee, S-W., Aronson, A., Bashir, R., Electrical detection of germination of model Bacillus Anthracis spores in microfluidic biochips. Lab Chip. 2007. v. 7. p. 603-610.
- Maldonado, Y., Fiser, J., Nakatsu, C.H., Bhunia, A.K., Cytotoxicity potential and genotypic characterization of Escherichia coli isolates from environmental and food sources. Applied and Environmental Microbiology. v. 71. p. 1890-1898 (2005).
- Menon, A., Shroyer, M.L., Wampler, J.L., Chawan, C.B., Bhunia, A.K., In vitro Study of Listeria monocytogenes Infection to Murine Primary and Human Transformed B Cells. Comparative Immunology, Microbiology & Infectious Diseases. 2003. v. 26. p. 157-174.
- Morgan, M.T., Kim, G., Ess, D.R., Kothapalli, A., Hahm, B.K., Bhunia, A.K., Binding inhibition assay using fiber-optic based biosensor for the detection of foodborne pathogens. Key Engineering Materials. v. 321-323. p. 1145-1150 (2006).
- Nanduri, V., Bhunia, A.K., Tu, S.-I., Paoli, G.C., Brewster, J.D., SPR biosensor for the detection of L. monocytogenes using phage displayed antibody. Biosensors & Bioelectronics. 2007 (in press)
- Nanduri, V., Kim, G., Morgan, M.T., Ess, D. Hahm, B.-K., Kothapalli, A., Valadez, A.,Geng, T., Bhunia, A.K., Antibody immobilization on waveguides using a flow-through system show improved Listeria monocytogenes detection in an automated fiber optic biosensor: RAPTOR™. Sensors. v. 6. p. 808-822 (2006).
- Sage, L., Detecting pathogens on produce. Analytical Chemistry. pp 7-9. (2007)
- Sarkisova, S., Patrauchan, M.A., Berglund, D., Nivens, D.E., Franklin, M.J., Calium-induced virulence factors associated with the extracellular matrix of mucoid Pseudomonas aeruginosa biofilms. Journal of Bacteriology. v. 187. p 4327-4337 (2005).
- Shim, S.M., Santerre, C.R., Burgess, J., Deardorff, D.C., Omega-3 fatty acids and total PCB in 26 dietary supplements. Journal of Food Science. 2003. v. 68(8) p. 2436-2440.
- Shim, S.M., Santerre, C.R., Dorworth, L.E., Miller, B.K., Stahl, J.R., Deardorff, D.C., Prediction of PCB content in sportfish using semipermeable membrane devices (SPMDs). Journal of Environmental Science and Health. 2004. Part B, B39(2) p. 263-271.
- Shroyer, M., Bhunia, A.K., Development of a rapid 1-h fluorescence-based cytotoxicity assay for Listeria species. Journal of Microbiological Methods. 2003. v. 55. p. 35-40.
- Singh, N., Singh, R.K., Bhunia, A.K., Sequential disinfection of Escherichia coli O157:H7 inoculated alfalfa seeds before and during sprouting using aqueous chlorine dioxide, ozonated water and thyme essential oil. Lebensmittel-Wissenschaft & Technologie. 2003. v. 36. p. 235-243.
- Stewart, P.S., Franklin, M.J., Physiological heterogeneity in biofilms. Nature Reviews Microbiology. 2008. v. 6 p.199-210.
- Sun, L., Yu, C., Irudayaraj, J., Surface enhanced raman scattering based nonfluorescent probes for multiplex DNA detection. Analytical Chemistry, (accelerated publication, available online, Apr 27, 2007).
- Vermerris, W., Saballos, A., Ejeta, G., Mosier, N. S., Ladisch, M. R., Carpita, N. C., Molecular breeding to enhance ethanol production from corn and sorghum stover. Crop Science Society of America. 2007. v. 47(S3). p. S142-S153.
- Wampler, J.L., Kim, K.P., Jaradat, Z.W., Bhunia, A.K., Heat-shock protein 60 acts as a receptor for the Listeria adhesion protein in Caco-2 cells. Infection and Immunity. 2004. v. 72(2). p. 931-936.
- Wang, C., Irudayaraj, J., Gold nanorod probes detects multiple pathogens. Small - a Nanotechnology Journal. 2008. (In Press).
- Wang, H.Y., Bhunia, A.K., Lu, C., A microfluidic flow-through device for high throughput electrical lysis of bacterial cells based on continuous DC voltage. Biosensors & Bioelectronics. v. 22 p. 582-588 (2006).
- Ximenes, E. A., Dien, B. S., Ladisch, M. R., Mosier, N., Cotta, M. A., Li, X. L., Enzyme production by industrially relevant fungi cultured on feed co-product from corn dry grind ethanol plants. Applied Biochemistry and Biotechnology. 2007. v. 136-140 (1-12). p. 171-183.
- Yang, L., Banada, P., Chatni, M. R., Lim, K, Ladisch, M., Bhunia, A., Bashir, R., "A MultiFunctional Micro-Fluidic System for Dielectrophoretic Concentration Coupled with Immuno-Capture of Low Number of Listeria monocytogenes", Lab on a chip, appeared online June, 2006. DOI: 10.1039/b607061m.
- Yang, L., Banada, P.P., Liu, Y., Bhunia, A.K., Bashir, R., Conductivity and pH Dual Detection of Growth Profile of Healthy and Stressed Listeria monocytogenes, Biotechnology & Bioengineering. In press. (2005).
- Yang, L., Banada, P.P., Liu, Y.S., Bhunia, A.K., Bashir, R., Conductivity and pH dual detection of growth profile of healthy and stressed Listeria monocytogenes. Biotechnology and Bioengineering. 2005. v. 92. p. 685-693.
- Yang, L., Banda, P.P., Bhunia, A.K., Bashir, R., Effects of dielectrophoresis on growth, viability, and immuno-reactivity of Listeria monocytogenes. Journal of Biological Engineering. (2008) v. 2(6). p.
- Yang, L., Bashir, R., Electrical/electrochemical impedance for rapid detection of foodborne pathogenic bacteria. Biotechnology Progress, Biotechnology Advances. 2008. v. 26. p. 135-150.
- Yu, C., Irudayaraj, J., Multiplex biosensor using gold nanorods. Analytical Chemistry. 2007. v. 79(2) p. 572-579.
- Yu, C., Irudayaraj, J., Sensitivity and selectivity limits of multiplex nanoSPR biosensor assays. Biophysical Journal. 2007. v. 93(9) p.1-9.
- Zeng, M. N., Mosier, S., Huang, C-P., Sherman, D. M., Ladisch, M. R., Microscopic examination of changes of plant cell structure in corn stover due to cellulase activity and hot water pretreatment. Biotechnology Bioengineerg. 2007. v. 97(2). p. 265-278.
- Zhang, P., Wampler, J.L., Bhunia, A.K., Burkholder, K.M., Patterson, J.A., Whistler, R.L., Effects of arabinoxylans on activation of murine macrophages and growth performance of broiler chicks. Cereal Chemistry. 2004. v. 81(4). p. 511-514.
- Banada, P. P., Huff, K., Bae, E., Rajwa, B., Bayraktar, B., Aroonnual, A., Adil, A., Robinson, J. P., Hirleman, E. D., Bhunia, A. K. Label-free detection of multiple bacterial pathogens using light scattering sensor. Biosensors and Bioelectronics. 2009. v. 24. p. 1685-1692.
Abstracts for major papers/posters presented
- Bhunia, A. K. Food safety: Molecular and microbiological approaches to pathogen detection. International Symposium on Strategies for Technology Development for Ensuring Agro Food Safety. Seoul, Korea. July 8-9, 2009.
- Bhunia, A. K., Hirleman, E. D., Rajwa, B., Robinson, J. P. Sample preparation and light scattering biosensors for pathogen detection. USDA-ARS-FSIS Joint Meeting. Shepherdstown, WV. February 17-18, 2009.
- Bhunia, A. K., Hirleman, E. D., Rajwa, B., Robinson, J. P. The BARDOT system for pathogen detection. International Rapid Methods Workshop. Manhattan, KS. June 24, 2009.
- Bhunia, A. K. Optical biosensors for multipathogen detection. AIChE Midwest Regional Conference. Chicago, IL. September 23, 2008.
- Bhunia, A. K. Pathogen detection: From conventional to nanobiosensor methods. Seoul, Korea. July 10, 2009.
- Bhunia, A. K. Pathogen detection technologies. AES Chemunex. Paris, France. January 29, 2009.
- Davis, R., Burgula, Y., Deering, A., Irudayaraj, J., Reuhs, B. L., Mauer, L. J. Identification, enumeration, and differentiation of live and dead E. coli O157: H7 in ground beef using fourier transform infrared (FTIR) spectroscopy and a portable IR sensor. Institute of Food Technologists' Annual Meeting and Food Expo. Anaheim, CA. June 6-10, 2009.
- Davis, R., Burgula, Y., Reuhs, B. L., Mauer, L. J. Detection of live and dead Salmonella enterica from chicken breast using filtration and Dynabeads assays followed by fourier transform infrared (FTIR) spectroscopy. Institute of Food Technologists' Annual Meeting and Food Expo. Anaheim, CA. June 6-10, 2009.
- Deering, A. J., Reuhs, B. L., Mauer, L. J. Differentiation between live and dead bacterial cells using FT-IR spectroscopy and comparison of detection limits using quantitative PCR (qPCR). Institute of Food Technologists' Annual Meeting and Food Expo. Anaheim, CA. June 6-10, 2009.
- Irudayaraj, J. Multiplex detection of pathogens by SERS and plasmonics. Nanorods and Microparticles in Homeland Security. American Chemical Society. Washington DC. August 16-21, 2009.
- Jagadeesan, B., La, D., Kihara, D., Bhunia, A. K. N terminal Gly224-Gly411 domain in Listeria adhesion protein (LAP) interacts with receptor Hsp60. American Society for Microbiology General Meeting. Philadelphia, PA. May 17-21, 2009.
- Koo, O. K., Jagadeesan, B., Burkholder, K., Liu, Y-S., Ladisch, M. R., Bashir, R., Linton, R., Bhunia, A. K. Mammalian cell receptor, Hsp60 on microfluidic biochip allows improved capture and detection of Listeria monocytogenes. Food Micro. Aberdeen, Scotland. September 1-4, 2008.
- Ohk, S. H., Koo, O. K., Bhunia, A. K. Concurrent detection of Listeria monocytogenes, E. coli O157 and Salmonella enterica from artificially inoculated food samples with fiber-optic biosensor. Institute of Food Technologists Annual Meeting.
- Paarlberg, K. R., Hanna, H. M., Erbach, D. C., Hartzler, R. G. Cultivator design for interrow weed control on no till corn. American Society for Agricultural Engineers. 1995.
- Steinheimer, T. R. Chemical fate of herbicides within a small agricultural watershed. American Chemical Society. 1995.
- Sun, L., Irudayaraj, J. Confocal raman-based nanoarray platform from multiplex detection using non-fluorescent tags. The 12th Annual Meeting of IBE. March 29-April 1 .
- Yi-Shao, L., Banada, P. P., Bhunia, A. K., Bashir, R. Label-free detection of PCR amplification. The 7th IEEE Sensors Conference. Lecce, Italy. October 26 - 29, 2008.
- Zordan, M. D., Grafton, M. G., Park, K., Leary, J. F. The design of a microfluidic biochip for the rapid, multiplexed detection of foodborne pathogens by surface plasmon resonance imaging. Submitted to the SPIE Photonics West Conference, San Francisco, CA. January 23-28, 2010.
- Applegate, B.M., Detection of pathogenic bacteria by exploiting bacteriophage specificity and the Vibrio fischeri quorum system. The 226th ACS National Meeting, New York, NY. 2003. Abstract 100.
- Banada, P., Yang, L., Bashir, R., Bernas, T., Robinson, J., Bhunia, A.K., Performance Evaluation of a Low Conductive Growth Medium for Listeria monocytogenes, by Conventional and Proteomics Approaches, 105th General Meeting of American Society of Microbiology, Atlanta, Georgia, USA P-059 p. 449 (June 5, 2005).
- Banada, P.P., Bernas, T., Robinson, J.P., Bhunia, A. K., Proteomic analysis of cytotoxic factors from Bacillus cereus. American Society for Microbiology General Meeting. Toronto, ON. May 21-25, 2007.
- Banada, P.P., Bernas, T., Robinson, J.P., Bhunia, A.K., Proteomic analysis and identification of cytotoxic factors from Bacillus cereus. P-097, 107th American Society for Microbiology (ASM) Annual Meeting. May 21-25, Toronto, Canada pp 206., 2007.
- Bashir, B., "BioMEMS and Bionanotechnology and Applications to Diagnostics", Plenary Session Monday Oct 31st, Topical Conference "Biomedical Applications of Nanotechnology (Bionanotechnology)", AIChE 2005 Annual Meeting, Oct 31st - Nov 4th, Cincinnati, OH (invited).
- Bashir, R., BioMEMS and Bionanotechnology and Applications to Diagnostics, in N.A. Peppas and J.Z. Hilt, eds., "Advances in Bionanotechnology", pp. 1-5, AIChE, New York, NY, 2005 (invited).
- Bashir, R., BioMEMS and bionanotechnology: Integration of life sciences and engineering at the micro and nanoscale. The Knowledge Foundation's 10th Annual Conference, BioDetection Technologies. Atlanta, GA. June 14-15, 2007.
- Bashir, R., Interfacing Silicon and Biology at the Micro and Nanoscale. NSF USA-EU Workshop on Bionanotechnology. Ispra, Italy. May, 2008.
- Bashir, R., Interfacing silicon and biology at the micro and nanoscale. University of Cincinnati, Nanomedicine Center Seminar Series. Cincinnati, OH. February 18, 2008.
- Bashir, R., Ahmad, I., BioMEMS and bionanotechnology for development of miniaturized instruments. Symposium on Center for Analytical Instrumentation Development. West Lafayette, IN. June 18, 2008.
- Bashir, R., Akin, D., Gomez, R., Li, H., Chang, W.J., Gupta, A., From BioMEMS to Bionanotechnology: Integrated Biochips for the Detection of Cells and Microorganisms. Materials Research Society Symposium Proceedings, v. 773. p. 117-124 San Francisco, CA, 2003. (Invited Paper).
- Bashir, R., Bhunia, A., Ladisch, M., Engineering of biosystems for the detection of Listeria monocytogenes in foods-development of a biochip. Manhattan, KS. June 18, 2008.
- Bayraktar, B., Banada, P. P., Hirleman, E. D., Bhunia, A. K., Robinson, J. P., Rajwa, B., Feature Extraction, Identification and Classification of Listeria colonies from light scatter patterns. 14th Annual GLIIFCA Meeting. 2005.
- Bayraktar, B., Banada, P.P., Hirleman, E D, Bhunia, A.K., Robinson, J.P., Rajwa, B., Feature extraction from light-scatter patterns of Listeria colonies for identification and classification. Journal of Biomedical Optics 2006. v. 11 paper no. 034006.
- Bhattacharya, S., Salamat, S., Banada, P., Liu, Y., Morisette, D., Bhunia, A. K., Akin, D., Bashir, R., Integrated detection of microorganisms in a microfluidic biochip. Biomedical Engineering Society (BMES) Annual Meeting. Los Angeles, CA. September 27-29, 2007.
- Bhunia, A.K., Study of Listeria monocytogenes survival / inactivation on a new conveyor design. Institute of Food Technologist General Meeting. 2003. Abstract p. 85.
- Bhunia, A.K., Geng, T., Lathrop, A. Valadez, A., Morgan, M.T., Optical immunosensors for detection of Listeria monocytogenes and Salmonella Enteritidis from food. Proceeding of SPIE. 2004. v. 5271. p. 1-6.
- Burgula, Y., Cousin, M.A., Applegate, B., Linton, R., Reuhs, B.L., Mauer, L.J., Effects of processing treatments on FT-IR based classification of dead E. coli K12 cells in comparison to live cells. Institute of Food Technologists’ Annual Meeting and Food Expo. 2006. Orlando, FL.
- Burgula, Y., Cousin, M.A., Reuhs, B.L., Mauer, L.J., Differentiation of Live vs. Dead cells of E. coli O157:H7 based upon incubation and immunomagnetic separation. Institute of Food Technologists' Annual Meeting and Food Expo. 2006. Orlando, FL.
- Burgula, Y., Khali, D., Kim, S., Cousin, M.A., Reuhs, B.R., Mauer, L.J., Development of a method to detect Salmonella Typhimurium using FT-IR spectroscopy. International Food Safety and Quality Conference. 2003. Abstract.
- Burgula, Y., Khali, D., Kim, S., Cousin, M.A., Reuhs, B.R., Mauer, L.J., Development of a method to improve the sensitivity and selectivity for detection of E. coli O157:H7 using FT-IR spectroscopy. Institute of Food Technologists’ Annual Meeting and Food Expo. 2004. Abstract 25534, Session 114D, poster no. 19.
- Burgula, Y., Khali, D.M., Kim, S., Cousin, M.A., Reuhs, B.L., Mauer, L.J., A rapid method for detection of E. coli O157:H7 using Dynabeads® and FTIR spectroscopy. International Association for Food Protection (IAFP) 91st Annual Conference. 2004. Abstract. Poster no. 145.
- Burkholder, K. M., Kim, K.-P., Hahm, B.-K., Mishra, K., Medina-Maldonado, S., Bhunia, A. K., Anaerobic environment increases surface localization of Listeria Adhesion Protein (LAP) and promotes infectivity of Listeria monocytogenes. American Society for Microbiology General Meeting. Boston, MA. June 1-5, 2008.
- Burkholder, K.M., Bhunia, A.K., Interaction of Salmonella with cultured intestinal cell lines during heat stress. American Society for Microbiology General Meeting. 2005. p. 445. Abstract No. P-041.
- Burkholder, K.M, Bhunia, A.K., Interaction of Salmonella with cultured intestinal cell lines during heat stress. American Society for Microbiology General Meeting. 2005, Abstract. p. 445.
- Bwatwa, J., Mosier, N.S., Huang, T., Liu, X., Stewart, A., Ladisch, C.M., Ladisch, M.R., Bacterial Transport in Rolled Stationary Phase Monoliths, Division of Analytical Chemistry, Paper 349, 229th National ACS Meeting of the American Chemical Society, San Diego, CA. Paper 349 (March 15, 2005).
- Chen, W., Ladisch, M.R., Geng, T., Bhunia, A.K., Biofunctional Membranes for Listeria monocytogenes Detection, BIOT Division Paper 112, 225th ACS National Meeting, Section: Advances in Bioseparations, New Orleans. 2003.
- Chen, W-T., Huang, T., Mosier, N.S., Ladisch, M.R., Fabrication of Press-fit Microdevices Using Modified Gold Wires, Division of Biochemical Technology, Paper 77, 229th National ACS Meeting of the American Chemical Society, San Diego, CA. Paper 77 (March 14, 2005).
- Davis, K.C., Bhunia, A.K., Detection of pathogenic Escherichia coli in food and environmental samples using PCR. American Society for Microbiology General Meeting. 2003. Abstract p. 494-495.
- Dominguez, W., Kim, S., Kim, H., Savikhin, S., Kane, M. Applegate, B.M., 2005. Multiplex PCR for the Simultaneous Detection of the Foodborne Pathogens: Escherichia coli O157:H7, Salmonella enterica, and Listeria monocytogenes. American Society for Microbiology General Meeting. Abstract P-080.
- Geng, T., Kim, K.P., Morgan, M.T., Bhunia. A.K., Antibody-based rapid detection of low levels of Listeria monocytogenes cells using a fiber optic biosensor. Institute of Food Technologist General Meeting. 2003. Abstract No. 76E-3.
- Gomez, R., Bashir, R., "Microscale Impedance-Based Detection of Bacterial Metabolism", in Encyclopedia of Rapid Microbiological Methods, Volume 3, Series Editor, Michael J. Miller, Davis Healthcare International Publishing (DHI. 2006. pp. 333-362.
- Gray, K.N., O’Neal, E., Bhunia, A.K., Quantitative detection of Bacillus cereus enterotoxin in 15 minutes using a mammalian cell enzyme release assay. American Society for Microbiology General Meeting. 2004. Abstract p. 498.
- Gross, B. D., Reed, T.S., Stoklosa, A.D., Schroeder, D.L., Nagel, A.C., Co, B., Nivens, D.E., Remote sensing of agricultural contaminants using biosensor networks over TCP/IP. 233rd Annual Meeting of the American Chemical Society. Presented April 23, 2007.
- Hahm, B.K., Geng, T., Bhunia. A.K., Effect of environmental stress of antibody-based detection of Escherichia coli O157:H7, Salmonella Enteritidis and Listeria monocytogenes cells. American Society for Microbiology General Meeting. 2004. Abstract p. 499.
- Hahm, B.K., Kim, H., Bhunia, A.K., Enrichment and detection of Escherichia coli O157:H7, Salmonella Typhimurium and Listeria monocytogenes using a sample preparation device, PEDD (Pathogen Enrichment and Detection Device). 107th American Society for Microbiology (ASM) Annual Meeting. May 21-25, Toronto, Canada. 2007.
- Huang, T., Chang, W.J., Akin, D., Gomez, R., Bashir, R., Mosier, N., Ladisch, M.R., Fabrication of Microfluidic Channels Using Microfibers with Poly(dimethylsiloxane), Poster Session: Advances in Biosensors and Biomedical Sensors I, Paper 193a, AIChE Annual Meeting, San Francisco, CA. 2003.
- Huang, T., Mosier, N.S., Ladisch, M.R., Rapid Prototyping of Purification Platforms, Division of Biochemical Technology, Paper 63, 229th National ACS Meeting of the American Chemical Society, San Diego, CA. Paper 63 (March 14, 2005).
- Huang, T.T., Geng, T., Akin, D., Chang, W., Sturgis, J., Bashir, R., Bhunia, A.K., Robinson, J.P., Ladisch, M.R., Biomediated Assembly of Functionalized Microbeads for Capture of Microorganisms. BIOT Division Paper 97, 225th ACS National Meeting, Section: Novel Bioanalyses Using Lab-on-a-Chip Technologies, New Orleans. 2003.
- Huff, K., Banada, P.P., Bayraktar, B, Bae, E, Rajwa, B, Robinson, J.P., Hirleman, E.D. Bhunia, A.K., Detection and Identification of Foodborne Pathogens in Genus and Species Levels Using a Non-invasive Modified Light Scatterometer-BARDOT. American Society for Microbiology Annual meeting. 2006. Abstract no. P-075.
- Irudayaraj, J., No-glow tags for Raman Spectroscopy. Analytical Chemistry News. June 1, 2007 (page 3961).
- Jagadeesan, B., Burkholder, K., Wampler, J.L., Bhunia, A.K., Interaction of Listeria adhesion protein (LAP) with human Hsp60 on the surface of stressed epithelial cells. American Society for Microbiology General Meeting. 2006. p. 48. Abstract No. B-103.
- Jagadeesan, B., Raizman, E., Nanduri, V., Bannantine, J., Bhunia, A.K., Rapid label free sero-diagnosis of Johne's disease using surface plasmon resonance biosensor. American Society for Microbiology General Meeting. Boston, MA. June 1-5, 2008.
- Jaradat, Z.W., Bhunia, A.K., Variation in adhesion and invasion behavior among different serotypes of Listeria monocytogenes to Caco-2 cells. American Society for Microbiology General Meeting. 2003. Abstract p. 376.
- Kim, K., Bhunia, A.K., Performance evaluation of a multiplex selective enrichment broth, SEL, by proteomic analysis and immunoassay. Institute of Food Technologist Annual Meeting. New Orleans, LA. June 29-July 2, 2008.
- Kim, K.P., Geng, T., Bhunia, A.K., Negative Regulation of LepA in Listeria monocytogenes Survival and Growth in Stress Conditions. Institute of Food Technologist General Meeting, Chicago, IL. 2003. Abstract 29G-13, p. 83.
- Kim, K.P., Jaradat, J.W., Bhunia, A.K., Alcohol acetaldehyde dehydrogenase homologue of Listeria monocytogenes is a Listeria adhesion protein (LAP) involved in pathogenesis. American Society for Microbiology General Meeting. 2003. Abstract p. 490.
- Kim, S., Burgula, Y., Ojaanen-Reuhs, T., Ruehs, B.R., Cousin, M.A., Mauer, L.J., Differentiation and classification of the phenol-phase soluble crude lipopolysaccharides from Eschericia coli strains using Fourier transform infrared spectroscopy and canonical variate analysis. Institute of Food Technologists’ Annual Meeting and Food Expo. 2004. Abstract.
- Kim, S., Reuhs, B.L., Burgula, Y., Mauer, L.J., Use of Fourier transform infrared spectroscopy for differentiation of outer membrane proteins from Salmonella enterica serotypes. Institute of Food Technologists' Annual Meeting and Food Expo. 2005. Abstract 89E-30.
- Koo, O. K., Jagadeesan, B., Burkholder, K., Bhunia, A.K., Targeted capture of pathogenic Listeria using a Listeria Adhesion Protein (LAP) specific mammalian cell receptor, Hsp60 for detection of bacteria on biosensor platforms. Institute of Food Technologists Annual Meeting. Chicago, IL. July 28-August 1, 2007.
- Koo, O. K., Shuaib, S., Ladisch, M. R., Bashir, R., Bhunia, A. K., Targeted capture of pathogenic Listeria using a Listeria Adhesion Protein (LAP) specific mammalian cell receptor, Hsp60 for detection of bacteria on biosensor platforms. American Society for Microbiology General Meeting. Boston, MA. June 1-5, 2008.
- Kwan S.L., Chang, W.J., Koo, Y.M., Bashir, R., "Embedding Microscale Metal Patterns In Polydimethylsiloxane Substrate" 2005. Ninth International Conference on Miniaturized Systems for Chemistry and Life Sciences (µTAS), Boston Marriott Copley Place, Boston, Massachusetts, USA October 9th - 13th.
- Lathrop, A., Kim, K.P., Bhunia, A.K., Development of Listeria monocytogenes specific antibodies through the use of genomics/proteomics. American Society for Microbiology General Meeting. 2004. Abstract p. 494.
- Lathrop, A.A., Bhunia, A.K., Expression of Listeria monocytogenes InlB and ActA surface proteins under different growth media. American Society for Microbiology General Meeting. 2005. p. 446, Abstract No. P-046.
- Lathrop, A.A., Bhunia, A.K., Expression of Listeria monocytogenes InlB and ActA surface proteins under different growth media. American Society for Microbiology General Meeting. 2005. Abstract. p. 446.
- Lenz, A.P., Williamson, K., Franklin M.J., Localized gene expression along vertical transects of Pseudomonas aeruginosa biofilms. American Society for Microbiology Meeting on Microbial Biofilms. 2008.
- Lenz, A.P., Williamson K., Franklin M.J., Quantification of cell numbers and riboscome content of Pseudomonas aeruginosa biofilms using laser microdissection and qRT-PCR. General Meeting of the American Society for Microbiology. 2008.
- Liu, Y., Banada, P., Bhattacharya, S., Akin, D., Bhunia, A. K., Bashir, R., Electrical characterization of DNA molecules in fluids using impedance measurements. Biomedical Engineering Society (BMES) Annual Meeting, Los Angeles, CA. September 27-29, 2007.
- Maldonado, Y., Bhunia, A.K., Adhesion and cytotoxic properties of enterohemorrhagic E. coli. American Society for Microbiology General Meeting. 2003. Abstract p. 490.
- Minocha, U., Bright, N., Perry, L., Applegate, B., Detection of the Foodborne Pathogen Escherchia coli O157:H7 Using an ainS Recombinant phiV10 Bacteriophage Based Bioluminescent Reporter System. ASM Biodefense Research meeting: Future Directions for Biodefense Research: Development of Countermeasures. Baltimore, MD. 2004. Abstract 100.
- Minocha, U., Perry, L.L., Jennings, R., Bhunia, A., Applegate, B., Genome Sequence Analysis and Evaluation of Strain Specificity of E. coli O157:H7 Bacteriophage phi V10. American Society for Microbiology, New Orleans, LA. 2004. Abstract M028.
- Mishra, K., Burkholder, K. M., Medina-Maldonado, S., Bhunia, A. K., Cloning, genomic organization and expression of SecA2 Gene in Listeria species. American Society for Microbiology General Meeting. Boston, MA. June 1-5, 2008.
- Morandage, J. S., Woloshuk, C. P., Cousin, M. A., Enzymatic release of DNA from Fusarium spores for use in real-time PCR. International Association for Food Protection. 2008. Abstract p.
- Morandage, J. S., Woloshuk, C. P., Cousin, M. A., Release of DNA from Fusarium spores for use in real-time PCR. Institute of Food Technologists. 2008. Abstract p.
- Nagel, A.C., Mauer, L.J. , Stoklosa, A.D., Franklin, M.J., Nivens, D.E., Quantification of cellular biomass and extracellular alginate from Pseudomonas aeruginosa biofilms using fourier transform infrared (FT-IR) spectroscopy. American Society for Microbiology, 107th Annual General Meeting. 2007.
- Nagel, A.C., Schroeder, D.L., Gross, B.D., Co, B., Nivens, D.E., Development of an arsenic sensing biosensor as a model for detection of chemical threat agents in food products. Institute of Food Technologist National Meeting. Chicago, IL. 2007.
- Naschansky, K.N., Budiarty, S., Sharma, A., Morgan, M., Bashir, R., Bhunia, A.K., Rapid detection of Listeria monocytogenes in naturally contaminated food samples through enzymatic and biosensor-based cytotoxicity analysis. American Society for Microbiology General Meeting. 2003. Abstract p. 497.
- Ngamwongsatit, P., Banada, P.P., Bhunia, A.K., Panbangred, W., Study on correlation between enterotoxin genes and cytotoxicity in Bacillus cereus isolated from patient, food and soil in Thailand. American Society for Microbiology General Meeting. Boston, MA. June 1-5, 2008.
- Paarlberg, K., Burgula, Y., Cousin, M.A., Reuhs, B.L., Mauer, L.J., 2006. Development of a FT-IR spectral library for select microorganisms. Institute of Food Technologists' Annual Meeting and Food Expo. Orlando, FL. Abstract.
- Padmapriya, B.P., Geng, T. Chen, W. Liu, L. Ladisch, M. R. Bhunia, A.K., Concentration of Listeria monocytogenes cells directly from meat samples using cell concentration and recovery (CCR) kit and detection by PCR and fiber optic biosensor. International Conference on Food Safety. 2003. Paper No.
- Perry, L.L., Bright, N.G., P. del Busto, M.D., Applegate, B.M., Comparison of the LuxR Proteins and Associated Operators from Vibrio fischeri Strains MJ-1 and ATCC 49387 (Microtox assay strain). American Society for Microbiology, New Orleans, LA. 2004. Abstract K056.
- Schroeder, D.L. , Nagel, A.C., Gross, B.D., Reed, T.S., Nivens, D.E., Bioreporter-based chemical sensor of arsenic in agricultural samples. 233rd Annual Meeting of the American Chemical Society. Presented April 23, 2007.
- Schroeder, D.L., Nagel, A.C., Gross, B.D., Reed, T.S., Ausloos, D.D., Nivens, D.E., Quantitative detection of arsenic in food using a bioreporter-based chemical sensor. Institute of Food Technologist National Meeting. New Orleans, LA. 2008.
- Selby, T.L., Wong, E., Han, Y., Gerrard, D.E., Linton, R.H., Effects of chlorine dioxide gas treatment on microbial safety and quality of fresh pork. 2005 Annual IFT meeting, July 16-20, New Orleans. 89F-31.
- Shen, X., Nivens, D.E., Corvalan, C.M., Predicting analytical response in bioreporter-based sensors for food and agriculture systems. 2006. Institute for Food Technologists, Orlando, FL: Session number 020B.
- Shroyer, M., Minocha, U., Lino, F., Bright, N., Perry, L., Applegate, B., Development of a Recombination System for Rapid Construction of E. coli O157:H7 Reporter Bacteriophage. American Society for Microbiology, New Orleans, LA. 2004. Abstract M017.
- Suanthie, Y., Woloshuk, C. P., Multiplex real-time PCR assay to detect and quantify three genera of mycotoxigenic fungi. Phytopathology. 2007. 2008. v.98. Abstract p. S205.
- Sun, L., Irudayaraj, J., Confocal raman based nanoarray platform for multiplex detection using non-fluorescent tags. The 12th Annual Meeting of the Institute of Biological Engineering. March 29-April 1.
- Valadez, A.M., Tu, S.-I. Tu, Bhunia, A.K., Development of a fiber-optic waveguide biosensor assay for the detection of Salmonella Enteritidis from poultry products. Institute of Food Technologist. Poster Abstract No. 098-31, 2007.
- Walker, S., Heinemann, P., Catchmark, J., Debroy., C., Irudayaraj, J., Detection of Escheria Coli using a novel scanning imaging surface Plasmon resonance biosensor. The 12th Annual Meeting of the Institute of Biological Engineering March 29-April 1, 2007.
- Wampler, J.L., Kim, K.P., Bhunia, A.K., Identification of Hsp60 as a putative receptor for the Listeria adhesion protein in Caco-2 cells. American Society for Microbiology General Meeting. 2003. Abstract p. 490.
- Woloshuk, C.P., Suanthie, Y., Real time PCR assay applications for distillers grain. Midwest Section Meeting of the Association of Analytical Communities International. 2008. Abstract p. 18.
- Y. Burgula, Kim, S., Cousin, M.A., Reuhs, B.L., Mauer, L.J., A rapid method for detection of E. Coli O157:H7 in fruit juice matrices using FT-IR spectroscopy. Institute of Food Technologists' Annual Meeting and Food Expo. 2005. Abstract 33-4.
- Zang, Y., Liu, X., Tyner, B., Stewart, A., Chen, W.-T., Sedlak, M., Mosier, N.S., Craig, B.,Ladisch, M.R., Probability Distribution Model for Predicting Cell Capture from Dilute Solutions for Microfluidic Biosensors, Division of Biochemical Technology, Poster 341, 229th National ACS Meeting of the American Chemical Society, San Diego, CA (March 16, 2005). Poster 341.
- Bhunia, A. K., Hirleman, E. D., Rajwa, B., Robinson, J. P. Sample preparation and light scattering biosensors for pathogen detection. USDA-ARS-FSIS Joint Meeting. Shepherdstown, WV. February 17-18, 2009.
Thesis/Dissertations
- Jagadeesan, B. Molecular characterization of Listeria adhesion protein (LAP), an alcohol acetaldehyde dehydrogenase homologue involved in the adhesion of Listeria monocytogenes to intestinal epithelial cells. Ph.D. Dissertation. 2009. Purdue University. 127 p.
- Bae, E., Analysis and characterization of multi-scale scattering : Application to bacterial colonies. Ph.D. Dissertation. Dec 2006. Purdue University. 148 p.
- Banerjee, P., Mammalian cell based biosensor for rapid screening of pathogenic bacteria and toxins. Ph.D. Dissertation. 2008. Purdue University. 191 p.
- Burgula, Y., "Detection of select foodborne pathogens using FT-IR spectroscopy," Ph.D. Dissertation. 2006. Purdue University.
- Bwatwa, Jeremiah, Biomedical Engineering, Qualitative Assessment for the Filtration and Characterization of Homogenized Samples, M.S. Dissertation, 2004. Purdue University, 81 p.
- Chen, W., Biomedical Engineering, "Engineering and Analysis of Immobilized Enzyme System in Microfluidic Device," Ph.D. Dissertation. 2006. Purdue University, 135 p.
- Davis, K., Assessment of molecular virulence gene profiling and antibodies for rapid detection of pathogenic Escherichia coli isolates. Ph.D. Dissertation. 2005. Purdue University. 134 p.
- Davis, K.D., "Assessment of molecular virulence gene profiling and antibodies for rapid detection of pathogenic Escherichia coli isolates." Ph.D. Dissertation. 2005. Purdue University. 138 p.
- Gaba, Anjali, Agricultural and Biological Engineering. Bioprocess Engineering. M.S., (2000-2003), Covalent Immobilization of Antibody C11E9 on a Silica Surface for Use in a Biosensor and Capture of Antigen Listeria Monocytogenes Using the Immobilized Antibody.
- Geng, T., Study of antibodies to stress induced cellular antigens of Listeria monocytogenes and its detection using a fiber-optic biosensor in food. PhD Dissertation. 2004. Purdue University. 140 p.
- Geng, Tao, Food Science, Ph.D., (2001-2004), Study of Antibodies to Stress Induced Cellular Antigens of Listeria monocytogenes and its Detection Using a Fiber-Optic Biosensor in Food. Dissertation Defended: April 6, 2004.
- Gomez, Rafael, Electrical and Computer Engineering, Ph.D., (2001-2003), Microfabricated Device for Impedance-Based Electronic Detection of Bacterial Metabolism. Dissertation Defended: November 26, 2003.
- Guo, S., Optical scattering for bacterial colony detection and characterization. Master of Science Dissertation. 2004. Purdue University. 98 p.
- Haibo Li, Dielectrophoresis And Its Applications In Biochips, Electrical and Computer Engineering, 2004, Ph.D. Dissertation, 156 Pages.
- Huff, K., The light scatterometer BARDOT as a noninvasive sensor for the identification of common foodborne bacteria. M.S. Thesis. 2008. Purdue University. 172 p.
- Kim, H.A., Selective enrichment medium for simultaneous growth and detection of Escherichia coli O157:H7, Listeria monocytogenes, and Salmonella Enteritidis from food. 2007. Purdue University. p. 126
- Kim, K-P., Genetic identification and characterization of Listeria adhesion protein, an alcohol acetaldehyde dehydrogenase homologue in Listeria monocytogenes. Ph.D. Dissertation. 2004. Purdue University. 164 p.
- Lathrop, A.A., "Development of Listeria monocytogenes specific antibodies using a proteomic/genomics approach and expression of antibody-specific antigens InlB and ActA under different environments. Ph.D. Dissertation." 2005. Purdue University. 142 p.
- Lathrop, A.L., Development of Listeria monocytogenes specific antibodies using a proteomics/genomics approach and expression of antibody-specific antigens InlB and ActA under different environments. Ph.D. Dissertation. 2005. Purdue University. 142 p.
- Liu, Y.-S., Impedance spectroscopy based micro-scale biosensing. Ph.D. Thesis. 2008. Purdue University.
- Maldonado, Y., Characterization of Escherichia coli from food, clinical and environmental sources by genomic typing, cytotoxicity analysis and by adhesion to eukaryotic cells. MS Thesis. 2004. 116 p.
- Maldonado, Y., Characterization of Escherichia coli from food, clinical and environmental sources by genomic typing, cytotoxicity analysis and by adhesion to eukaryotic cells. MS Dissertation. 2004. Purdue University. 116p.
- Nagel, A.C., "Development and analysis of bioreporters in biofilms," Masters Thesis. 2006. Purdue University.
- Naschansky, K.M., Cytotoxicity and cell-based sensors for detection of Listeria monocytogenes and Bacillus cereus. PhD Dissertation. 2004. Purdue University. 115 p.
- Shin, J., Biobattery. Ph.D. Thesis. 2008. Purdue University.
- Stewart, Amanda, Agricultural and Biological Engineering, Bioprocess Engineering, "Rapid Concentration and Recovery of Pathogens in Vegetables Using Membrane Separations," M.S. Dissertation, 2004. Purdue University, 144 p.
- Valadez, A.M., Development of a fiber-optic waveguide biosensor assay for the detection of Salmonella Enteritidis in food. M.S. Thesis 2006. Purdue University. 105 p.
- Vierra, J. M., Detection of Fusarium graminearum and Fusarium verticillioides by immunocapture real-time PCR. M.S. Thesis. 2004. Purdue University. 69 p.
- Wampler, J.L., Listeria monocytogenes adhesion to intestinal cells is mediated in part, by interaction of Listeria adhesion protein with a eukaryotic cell receptor, heat shock protein 60. PhD Dissertation. 2003. Purdue University. 86 p.
- Wang, H.Y., Microfluidic electroporation and cell arrays. Ph.D. Dissertation. 2007. Purdue University. 166 p.
- Bae, E., Analysis and characterization of multi-scale scattering : Application to bacterial colonies. Ph.D. Dissertation. Dec 2006. Purdue University. 148 p.
Books and Book Chapters
- Kizil, R., Irudayaraj, J. Application of raman spectroscopy for food quality measurement. Irudayaraj, J., Reh, C. editors. IFT Press, Blackwell Publishing Professional, Ames, IA. Nondestructive Testing of Food Quality. 2008. p. 143-164.
- Kizil, R., Irudayaraj, J. FT-raman spectroscopy for food and biomaterial characterization. Irudayaraj, J., Christoph, editors. IFT Press, Blackwell Publishing Professional, Ames, IA. Nondestructive Sensing for Food Quality. 2007.
- Yang, L., Cheng, X., Liu, Y., Bashir, R. Lab-on-a-chip impedance detection of microbial and cellular activity. Yaakov, N., Bhatia, S., editors. Artech House, Boston, MA. Microdevices in Biology and Medicine (Methods in Bioengineering Book Series). 2009.
- Amass, S.F., Bhunia, A.K., Chaturvedi, A., Dolk, D., Peeta, S., Atallah, M., Advances in Homeland Security, 2006. Vol. 1, The Science of Homeland Security, Purdue University Press, West Lafayette, IN
- Banada, P.P., Bhunia, A.K., Antibodies and immunoassays for detection of bacterial pathogens. Zourob, M., Turner, P.F., editors. Cambridge University, Manchester, UK. Section II. Biorecognition. New Technologies for Bacterial Pathogen Detection.
- Bao, N., Lu, C., Microfluidics-based lysis of bacteria and spores for detection and analysis. Zourob, M., Elwary, S., Turner, A., editors. Springer, New York, NY. Principles of Bacterial Detection: Biosensors, Recognition Receptors and Microsystems. 2008. p. 783-796.
- Bhunia, A.K., Detection of significant bacterial pathogens and toxins of interest in homeland security. Amass, S.F., Bhunia, A.K., Chaturvedi, A.R., Dolk, D.R., Peeta, S., Atallah, M.J. editors. Purdue University Press, West Lafayette, IN. Advances in Homeland Security Vol. 1. The Science of Homeland Security, 2006. p. 109-149.
- Bhunia, A.K., Microbial Foodborne Pathogens: Mechanisms and Pathogenesis. First Edition, Springer, New York, NY. 2008. 276 p.
- Bhunia, A.K., Lathrop. A., Foodborne Pathogen Detection, McGraw-Hill Professional, New York, NY. McGraw-Hill 2003 Year Book of Science and Technology, 2003. p.320-323.
- Bhunia, A.K., Wampler, J.L., Animal and cell culture models for foodborne pathogens. Fratamico, P., Bhunia, A.K., Smith, J.L. editors. Horizon Scientific.
- Geng, T., Bhunia, A.K., 2007. Optical biosensors in foodborne pathogen detection. Smart Biosensor Technology. CRC Press, (Editors: Knopf and Bassi), Taylor and Francis group, Boca Raton, FL p. 505-519.
- Irudayaraj, J., Christoph, R., Nondestructive Sensing for Food Quality. IFT Press, Blackwell Publishing Professional. Ames, IA. 2007.
- Kim, Y., Hendrickson, R., Mosier, N. S., Ladisch, M. R., Liquid hot water pretreatment of cellulosic biomass. Methods in Molecular Biology. (In press).
- Kizil, R. and Irudayaraj, J., FT-Raman spectroscopy for food and biomaterial characterization. Irudayaraj, J., Christoph, R. editors. IFT Press, Blackwell Publishing Professional, Ames, IA. Nondestructive Sensing for Food Quality. 2007.
- Kizil, R., Irudayaraj, J., 2007. FT-Raman spectroscopy for food and biomaterial characterization. Nondestructive sensing for food quality. IFT Press, (Editors. Irudayaraj and Christoph), Blackwell Publishing Professional, Ames, IA 50014.
- Kizil, R., Irudayaraj, J., FT-Raman spectroscopy for food and biomaterial characterization. Elsevier Publications Ltd. In Modern Techniques for Food Authentication. (In Press)
- Ray, B., Bhunia, A.K., Fundamental Food Microbiology. 4th Edition. CRC Press, Taylor and Francis group, Boca Raton, FL. 2008. 491 p.
- Schwietzke, S., Kim, Y., Ximenes, E., Mosier, N., Ladisch, M., Ethanol production from maize. Brian Larkins, editor. Biomass for Maize Biotechnology. (In press).
- Wang, H.Y., Banada, P.P., Bhunia, A.K., Lu, C., Rapid electrical lysis of bacterial cells in a microfluidic device. Floriano, P.N., editor. Humana Press, Totowa, NJ. Methods in Molecular Biology vol. 385: Microchip-based Assay Systems: Methods and Applications. 2007. p. 23-35.
- Yu, C., Irudayaraj, J., Sensitivity and selectivity limits of multiplex nanoSPR biosensor assays. Nagarajan, R. editor. American Chemical Society Books, American Chemical Society. Nanoparticles: Synthesis, Passivation, Stabilization, and Functionalization. 2007.
- Zeng, M., Ladisch, M. R., Breaking barriers to cellulosic ethanol: understanding interactions between modifications of plant cells, enzymes and pretreatments. Plant Biotechnology Reviews. (In press).
- Kizil, R., Irudayaraj, J. FT-raman spectroscopy for food and biomaterial characterization. Irudayaraj, J., Christoph, editors. IFT Press, Blackwell Publishing Professional, Ames, IA. Nondestructive Sensing for Food Quality. 2007.
Articles in Popular Press
- Bhunia, A. K. Chip can make sure safe food products aren't unduly discarded. Purdue University News Service. March 27, 2009.
- Bhunia, A. K. New technique for L. monocytogenes detection. Food Quality eNewsletter. Available: eNews@wiley.com. May 13, 2009.
- Advancing rapid microbial testing. Food Technology. 60 (9) p. 69-72. (2006)
- Detecting pathogens on produce. Analytical Chemistry. p. 7-9. (2007).
- Pinpointing bacteria. R&D Magazine. 48 (8) p. 68. (2006).
- Bhunia, A. K. New technique for L. monocytogenes detection. Food Quality eNewsletter. Available: eNews@wiley.com. May 13, 2009.
Patents Granted
- Gomez, R., Bashir, R. Biosensor and related method. U.S. Patent 7,435,579.
- Multiplex biosensor using gold nanostructures. U.S. Provisional Patent Application 64803.P1.US.
- Purdue Research Foundation. Identity profiling of cell surface markers. U.S. Provisional Patent Application 64892.P2.US.
- 64803.P1.US - Multiplex Biosensor Using Gold Nanostructures. Provisional patent application filed on February 23, 2007.
- Multiplex biosensor using gold nanostructures. 2007. U.S. Provisional Patent Application 64803.P1.US.
- Purdue Research Foundation. Identity profiling of cell surface markers. 2008. U.S. Provisional Patent Application 64892.P2.US.
- Bashir, R., Gomez, R., Ladisch, M., Bhunia, A., Robinson, J.P., US Patent # 6,716, 620, "Biosensor and Related Method," (April 6, 2004).
- Bashir, R., Gomez,R., Robinson, P., Bhunia, A., Ladisch, M.R., Biosensor and Related Method, US Patent 6,716,620 B2 (April 6, 2004).
- Bhunia, A.K., Hahm, B.K., Morgan, M.T., Pathogen enrichment detection device and methods of use. 2005. Ref. No. 64303.P1US
- Gomez, R., Bashir, R., Bhunia, A. K., Ladisch, M., Robinson, J. P., Biosensor and Related Method. 2007. U.S. Patent 7,306,924 US.
- Hirleman, E.D., Guo, S., Bae, E., Bhunia, A.K., System and method for rapid detection and characterization of bacterial colonies using forward light scattering. U.S. Patent 64142.00.
- Hirleman, E.D., Guo, S., Bhunia, A.K., Bae, E. System and method for rapid detection and characterization of bacterial colonies using forward light scattering. 2005. Ref. No. 64142.00.US
- Ladisch et al, Cell Concentration and Pathogen Recovery, 11/081 378 (2005).
- Sayler, Gary S., Ripp, Steven A., Applegate, B., Bioluminescent biosensor device. U.S. Patent 6,544,729.
- Multiplex biosensor using gold nanostructures. U.S. Provisional Patent Application 64803.P1.US.
Invited Lectures and Seminars
- Bashir, R. Bacterial detection on a chip. Harvard/MGH CIMIT Summer Education Series. July 16th, 2008.
- Bashir, R. Bionanoelectronic sensing on a chip. NSF-Sponsored GEM4 Summer School on Cellular and Molecular Mechanics. Urbana-Champagne, IL. June 8-19, 2009.
- Bashir, R. Interfacing life sciences and engineering at the micro- and nanoscale. Invited. Nanotechnology Seminar Series. Nashville, TN. April 15th, 2009.
- Bashir, R., Liu, Y. S., Akin, D., Elibol, O. H., Reddy, J., Park, K. Interfacing silicon, biology, and medicine at the micro- and nanoscale: Opportunities and prospects. Invited. BioMEMS Topical Session at the AVS 55th International Symposium & Exhibition. Boston, MA. October 19-24, 2008.
- Bhunia, A. K. Biosensor based methods in food safety and biosecurity applications. Keynote lecture. International Fermented Food Expo (IFFE). Jeonju, Jeonbuk, Korea. October 24-25, 2008.
- Bhunia, A. K. Biosensors and bio-based methods for the separation and detection of foodborne pathogens. Plenary Talk. Rapid Methods Europe. Noordwijkerhout, The Netherlands. January 26-28, 2009.
- Bhunia, A. K. Multipathogen detection strategies using biosensors. Plenary Talk. Food Micro. Aberdeen, Scotland, UK. September 1-4, 2008.
- Bhunia, A. K. Pathogen detection: From conventional to nanobiosensor approaches. Plenary talk. 49th Annual Meeting of the Association of Microbiologist of India. Delhi, India. November 18-20, 2008.
- Davis, R., Reuhs, B. L., Mauer, L. J. Detection of Escherichia coli O157:H7 in ground beef using fourier transform infrared (FT-IR) spectroscopy coupled with filtration and Dynabeads assays. CFSE/USDA 10th Annual Research Workshop. Philadelphia, PA. November 2008.
- Deering, A. J., Mauer, L. J. Infrared spectroscopy applications for pathogen detection. Rapid Methods Workshop. Manhattan, KS. June 2009.
- Deering, A. J., Reuhs, B. L., Mauer, L. J. Differentiation between live and dead bacterial cells using FT-IR spectroscopy and verification using quantitative PCR (qPCR). CFSE/USDA 10th Annual Research Workshop. Philadelphia, PA. November 2008.
- Ladisch, M., Bhunia, A., Bashir, R., Linton, R. Engineering of biosystems for the detection of Listeria monocytogenes in foods-Development of a biochip. Manhattan, KS. June 18, 2008.
- Ladisch, M., Bhunia, A., Bashir, R., Robinson, P., Linton, R. Bioseparation and concentration techniques used to improve food sampling. Manhattan, KS. June 24, 2009.
- Linton, R., Ladisch, M., Bhunia, A. Detection and control of foodborne hazards. USDA Food Safety Meeting. Shepardstown, W.V. February, 25, 2009.
- Bashir, R., BioMEMS to Bionanotechnology: State of the Art in Integrated Biochips and Future Prospects, Plenary Session II (Nov 10th): Advances in Biomaterials, Bionanotechnology, Biomimetic Systems and Tissue Engineering, AIChE 2004 Annual Meeting, Austin Convention Center, Austin, TX. (invited), (November 7-12).
- Bashir, R., BioMEMS to Bionanotechnology: State of the Art in Integrated Biochips and Future Prospects, SPIE Optics East: Nanosensing: Material and Devices, Pennsylvania Convention Center, Philadelphia, PA. (invited), (October 25-28, 2004).
- Bashir, R., Gupta, A., Akin, D., Jang, J. Nano-mechanical Resonant Sensors for Virus Detection, Chemical and Biological Sensing with Microcantilevers, American Physical Society Annual Meeting, Los Angeles, CA. (Invited), (March 21, 2005).
- Bhunia, A.K., Bacterial Pathogen Detection: Micro/Nano-Technology Approaches. Indian Institute of Chemical Biology, Calcutta, West Bengal, India. Dec 21, 2005.
- Bhunia, A.K., Biosensor – the next frontier in pathogen detection Auburn University, Auburn, AL. (March, 2004).
- Bhunia, A.K., Listeria monocytogenes Pathogenesis: Intestinal Phase of Infection. Indian Institute of Technology, Guwahati, Assam, India. Dec 5, 2005.
- Bhunia, A.K., Microbiology Meets Nanotechnology. Indian Institute of Technology, Guwahati, Assam, India. Dec 5, 2005.
- Bhunia, A.K., Optical immunosensors and cell-based detection for Listeria monocytogenes. International Rapid Methods Workshop, Kansas State University, Manhattan, KS. July, 2006.
- Bhunia, A.K., Pathogenesis of Listeria monocytogenes and its detection strategies using micro/nano sensors. Department of Biology, Ball State University, Muncie, Indiana. Nov 4, 2005.
- Cheng, Z.-Y., Electroactive polymers for artificial muscles and biosensors. 3M Science and Engineering Faculty Day, St. Paul, Minnesota, USA, June 21, 2006.
- Cheng, Z.-Y., Chin, B.A., A radically new approach to rapidly detect biological threat agent. SPIE Defense & Security, April, Orlando, Florida, USA, 2006.
- Fu, L., Li, S., Zhang, K., Cheng, Z.-Y., A Novel Method for Monitoring Biological Quality of Surface Waters. 20th Annual Alabama Water Resource Conference, Orange Beach, Alabama USA, Sept. 7-8, 2006. - This poster was selected as the Best Student Poster (1st Place).
- Huang, T., Chen, W., Geng, T., Gomez, R., Bashir, R., Bhunia, A., Ladisch, M.R., Fundamentals of Nanotechnology: Relationship to Food Science and Technology, Invited Lecture, Paper 45-1, at the Annual Meeting of Institute of Food Technologiests, Symposium: Nanoscale Science, Engineering and Technology for Food Safety and Engineering, Las Vegas, NV (July 14, 2004).
- Ladisch, M., Biotechnology Industry Organization, Nanotechnology and Press-fit Microdevices, The 2nd Annual World Congress on Industrial Biotechnology and Bioprocessing, Orlando, FL (April 20, 2005).
- Ladisch, M. R., "Microfluidic Characterization of Press Fit Microdevices," University of Akron, Akron, OH (October 21, 2005).
- Ladisch, M. R., "Rapid Prototyping of Microfluidic Separation Platforms," North Carolina State University (February 3, 2006).
- Ladisch, M.R., Rapid Prototyping of Purification Platforms, University of Arizona (March 1, 2005).
- Ladisch, M.R., Huang, T., Armstrong, R., Mosier, N., Fundamentals of Nanotechnology in Agriculture, Division of Agricultural and Food Chemistry, Paper 205, 229th National ACS Meeting of the American Chemical Society, San Diego, CA (March 17, 2005).
- Li, H., Akin, D., Bashir, R., Applications of Dielectrophoretic "Tweezers" in Determining the Biological Receptor-Ligand Interaction Forces and Selectively Removing Different Species in Biochips, 46th Electronic Materials Conference, Notre Dame University, Notre Dame, Indiana, June 23-25, 2004
- Li, S., Fu, L., Wang, C., Lea, S., Engelhard, M., Arey, B., Cheng, Z.-Y., Microstructure and composition of Fe-B Nanobars. Materials Research Society Fall Meeting, Boston, Massachusetts, USA, 2006.
- Li, S.Q., Orona, L., Fu, L.L., Cheng, Z.-Y., Development of amorphous Fe-B nanorods and nanoarray as magnetostrictive acoustic resonator for sensor applications. US ONR Workshop on Transduction Materials and Devices, State College, Pennsylvania, May 10, 2006.
- Bashir, R. Bionanoelectronic sensing on a chip. NSF-Sponsored GEM4 Summer School on Cellular and Molecular Mechanics. Urbana-Champagne, IL. June 8-19, 2009.
Proceedings
- Bae, E., Bai, N., Aroonnual A., Bhunia, A. K., Robinson, J. P., Hirleman, E. D. Prediction of the light scattering patterns from bacterial colonies by a time-resolved reaction-diffusion model and scalar diffraction theory. Proceedings of SPIE. 2009. v. 7315.
- Bai, N., Bae, E., Aroonnual A., Bhunia, A. K., Robinson, J. P., Hirleman, E. D. Development of a real-time system of monitoring the bacterial growth and registering the forward scattering pattern. Proceedings of SPIE. 2009. v. 7315.
- Rajwa, B., Dundar, M., Patsekin, V., Huff, K., Bhunia, A. K., Venkatapathi, M., Bae, E., Hirleman, E., Robinson, J. P. Morphotypic analysis and classification of bacteria and bacterial colonies using laser light-scattering, pattern recognition, and machine-learning system. Proceedings of SPIE. 2009. v. 7306.
- Zordan, M. D., Grafton, M. M., Acharya, G., Reece, L. M., Aronson, A. I., Park, K., Leary, J. F. A microfluidic-based hybrid SPR/molecular imaging biosensor for the multiplexed detection of food-borne pathogens. Proceedings of SPIE. 2009. v. 7167. p. 716706-716706-10.
- Bai, N., Bae, E., Aroonnual A., Bhunia, A. K., Robinson, J. P., Hirleman, E. D. Development of a real-time system of monitoring the bacterial growth and registering the forward scattering pattern. Proceedings of SPIE. 2009. v. 7315.